Computing Guides and Tips
Computing Guides and Tips
Before diving into bioinformatics, it’s important to build a solid foundation in general computing. This section offers guides and practical tips on the essential tools and skills you’ll need — from navigating the command line to working with high-performance computing environments — to succeed in your bioinformatics analyses.
Much of the documentation below is adapted from UF Weecology under the CC BY 4.0 and from UF Research Computing and we commend these groups for their excellent documentation.
Generative AI
Code Style Guide
Computer Setup - Mac
Containers
File Compression Notes
Git - Collaboration
Git Tips
GitHub Actions
Globus for file transfer
HiPerGator Intro Guide
HiPerGator Reference
Lab Coding Guidelines
Parallelizing Code in R
Python - Package Docs
R Resources
RStudio + Git
Security & Privacy
Software Testing in R
Software Use Statistics
SSH
Workflow Tools