• Home
  • Hub
  • UF Health Cancer Center Bioinformatics Hub
    • Collaborating With Us
      • How To Work With Us
      • Who We Are
    • HiPerGator Computing
      • file-naming-conventions
      • HiPerGator Demo
      • HiPerGator for Bioinformatics
    • Git and GitHub
      • Git - Collaboration
      • Git Tips
      • GitHub Actions
      • RStudio + Git
    • Command Line Tools
      • File Compression Notes
      • SSH
    • R and Python Programming
      • Code Style Guide
      • Lab Coding Guidelines
      • Parallelizing Code in R
      • Python - Package Docs
      • R Resources
      • Software Testing in R
    • Workflow Management
      • Workflow Tools
    • Building and Deploying Web Applications
    • UFHCC BCB-SR In-House Tools
    • Experimental Design
      • RNA-seq
      • scRNA-seq
      • ATAC-seq
    • Analysis of Omics Data by Assay
      • RNA-seq
      • ATAC-seq
      • scRNA-seq
      • CRISPR Screen
      • Downstream Analysis
        • Pathway Analysis
      • Data Visualization
      • Data Sharing and Transfer
        • rclone
        • Globus for file transfer
      • Grant Proposal Resources and Support
        • DMSP
        • Publication Figures
        • Key Personnel
        • Bioinformatics Plan
      • Publishing Bioinformatics Methods
        • Code Availability Statment
        • Data Availability Statement
        • Publication Figures
        • Authorship
      • Web Applications
      • Presentations
      • Subscribe to Bioinformatics Updates
      • Bioinformatics Blog Posts, Papers, and News
        • Bioinformatics Blogs
        • Journal Club Papers
        • ST4US Journal Club Discussion Questions
      • Miscellaneous
      • Search Results
    • Collaborating With Us
      • How To Work With Us
      • Who We Are
    • HiPerGator Computing
      • file-naming-conventions
      • HiPerGator Demo
      • HiPerGator for Bioinformatics
    • Git and GitHub
      • Git - Collaboration
      • Git Tips
      • GitHub Actions
      • RStudio + Git
    • Command Line Tools
      • File Compression Notes
      • SSH
    • R and Python Programming
      • Code Style Guide
      • Lab Coding Guidelines
      • Parallelizing Code in R
      • Python - Package Docs
      • R Resources
      • Software Testing in R
    • Workflow Management
      • Workflow Tools
    • Building and Deploying Web Applications
    • UFHCC BCB-SR In-House Tools
    • Experimental Design
      • RNA-seq
      • scRNA-seq
      • ATAC-seq
    • Analysis of Omics Data by Assay
      • RNA-seq
      • ATAC-seq
      • scRNA-seq
      • CRISPR Screen
    • Downstream Analysis
      • Pathway Analysis
    • Data Visualization
    • Data Sharing and Transfer
      • rclone
      • Globus for file transfer
    • Grant Proposal Resources and Support
      • DMSP
      • Publication Figures
      • Key Personnel
      • Bioinformatics Plan
    • Publishing Bioinformatics Methods
      • Code Availability Statment
      • Data Availability Statement
      • Publication Figures
      • Authorship
    • Web Applications
    • Presentations
    • Subscribe to Bioinformatics Updates
    • Bioinformatics Blog Posts, Papers, and News
      • Bioinformatics Blogs
      • Journal Club Papers
      • ST4US Journal Club Discussion Questions
    • Miscellaneous
    • Search Results

    On this page

      Edit this page
      UF Health Cancer Center Bioinformatics Hub
      Analysis of Omics Data by Assay
      CRISPR Screen

      CRISPR Screen

      End-to-End MAGeCK Workflow for CRISPR Screen Data

      ← scRNA-seq 0001-01-01

      © 2025 UF Health Cancer Center Bioinformatics. Portions adapted from the Weecology Wiki by Weecology, used under CC BY 4.0.

      Published with Hugo Blox Builder — the free, open source website builder that empowers creators.